« Previous
Next »
Medical Image Analysis
Volume 12, Issue 5
, Pages 603-615
, October 2008
Effects of registration regularization and atlas sharpness on segmentation accuracy
References
- . Towards a coherent statistical framework for dense deformable template estimation. Journal of the Royal Statistical Society B. 2007;68:3–29
- . Unified segmentation. NeuroImage. 2005;26:839–851
- . High-dimensional image registration using symmetric priors. NeuroImage. 1999;9:619–628
- . Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of Royal Statistical Society B. 1995;57(1):289–300
- . On the statistical analysis of dirty pictures. Journal of Royal Statistical Society B. 1986;48(3):259–302
- Bhatia, K.K., Hajnal, J.V., Puri, B.K., Edwards, A.D., Rueckert, D., 2004. Consistent groupwise non-rigid registration for atlas construction. In: International Symposium on Biomedical Imaging.
- . ANIMAL
+
INSECT: improved cortical structure segmentation. Information Processing in Medical Imaging. 1999;1613:210–223 - Commowick, O., Stefanescu, R., Fillard, P., Arsigny, V., Ayache, N., Pennec, X., Malandain, G., 2005. Incorporating statistical measures of anatomical variability in atlas-to-subject registration for conformal brain radiotherapy. In: International Conference on Medical Image Computing and Computer-Assisted Intervention, LNCS 3750, pp. 927–934.
- . Cortical surface-based analysis I: segmentation and surface reconstruction. NeuroImage. 1999;9(2):179–194
- De Craene, M., du Bois d’Aische, A., Macq, B., Warfield, S., 2004. Multi-subject registration for unbiased statistical atlas construction. In: International Conference on Medical Image Computing and Computer-Assisted Intervention, LNCS 3216, pp. 655–662.
- . An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. NeuroImage. 2006;31:968–980
- . 3D statistical neuroanatomical models from 305 MRI volumes. Nuclear Science Symposium and Medical Imaging Conference, IEEE Conference Record. 1993;3(31):1813–1817
- . Cortical surface-based analysis II: inflation, flattening, and a surface-based coordinate system. NeuroImage. 1999;9(2):195–207
- . High-resolution intersubject averaging and a coordinate system for the cortical surface. Human Brain Mapping. 1999;8(4):272–284
- . Automated manifold surgery: constructing geometrically accurate and topologically correct models of the human cerebral cortex. IEEE Transactions on Medical Imaging. 2001;20(1):70–80
- . Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain. Neuron. 2002;33(3):341–355
- . Automatically parcellating the human cerebral cortex. Cerebral Cortex. 2004;14:11–22
- . Cortical folding patterns and predicting cytoarchitecture. Cerebral Cortex. 2007;
- . Landmark matching via large deformation diffeomorphisms on the sphere. Journal of Mathematical Imaging and Vision. 2004;20:179–200
- . Average brain models: a convergence study. Computer Vision and Image Understanding. 2000;77(2):192–210
- . Automatic anatomical brain MRI segmentation combining label propagation and decision fusion. NeuroImage. 2006;33(1):115–126
- . Tutorial on variational approximation methods. In: Advanced Mean Field Methods: Theory and Practice. MIT Press; 2000;
- . On the effective implementation of the iterative proportional fitting procedure. Computational Statistics and Data Analysis. 1995;19:177–189
- . Unbiased diffeomorphic atlas construction for computational anatomy. NeuroImage. 2004;23:151–160
- Kapur, T., Grimson, W.E.L., Kikinis, R., Wells, W., 1998. Enhanced spatial priors for segmentation of magnetic resonance imagery. In: International Conference on Medical Image Computing and Computer Aided Intervention, pp. 457–468.
- . Mindboggle: a scatterbrained approach to automate brain labeling. NeuroImage. 2005;(24):261–280
- . Automatic labelling of the human cortical surface using sulcal basins. Medical Image Analysis. 2000;4:179–188
- . Multi-modal image set registration and atlas formation. Medical Image Analysis. 2006;10(3):440–451
- . A joint transformation and residual image descriptor for morphometric image analysis using an equivalence class formulation. Mathematical Methods in Biomedical Image Analysis. 2006;
- . Automatic construction of an attributed relational graph representing the cortex topography using homotopic transformations. Proceedings of SPIE. 1994;2299:110–121
- . A probabilistic atlas of the human brain: theory and rationale for its development the international consortium for brain mapping (ICBM). NeuroImage. 1995;2(2):89–101
- . Multiscale 3D shape representation and segmentation using spherical wavelets. IEEE Transactions on Medical Imaging. 2007;26(4):598–618
- Nielsen, M., Johansen, P., Jackson, A.D., Lautrup, B., 2002. Brownian warps: a least committed prior for non-rigid registration. In: International Conference on Medical Image Computing and Computer-Assisted Intervention, LNCS 2489, pp. 557–564.
- . Human cingulate and paracingulate sulci: pattern, variability, asymmetry, and probabilistic map. Cerebral Cortex. 1996;6:207–214
- . A Bayesian model for joint segmentation and registration. NeuroImage. 2006;31:228–239
- . Numerical Recipes in C: The Art of Scientific Computing. 2nd ed.. Cambridge, UK: Cambridge University Press; 1992;
- . Automated sulcal segmentation using watersheds on the cortical surface. NeuroImage. 2002;15:329–344
- Richard, F., Samson, A., Cuenod, C., 2007. A SAEM algorithm for the estimation of template and deformation parameters in medical image sequences. Preprint MAP5, Nov.
- . Automatic recognition of cortical sulci of the human brain using a congregation of neural networks. Medical Image Analysis. 2002;6:77–92
- . Geometrically accurate topology-correction of cortical surfaces using non-separating loops. IEEE Transactions on Medical Imaging. 2007;26(4):518–529
- . Using a statistical shape model to extract sulcal curves on the outer cortex of the human brain. Transactions on Medical Imaging. 2002;21:513–524
- . Automated extraction of the cortical sulci based on a supervised learning approach. IEEE Transactions on Medical Imaging. 2007;26(4):541–552
- . A unified information theoretic approach to groupwise non-rigid registration and model building. Information Processing in Medical Imaging. 2005;9:1–14
- Van Leemput, K., 2006. Probabilistic brain atlas encoding using Bayesian inference. In: International Conference on Medical Image Computing and Computer Aided Intervention, pp. 704–711.
- . Automated model-based tissue classification of MR images of the brain. IEEE Transactions on Medical Imaging. 1999;18(10):897–908
- Weisenfeld, N., Warfield, S., 2007. Simultaneous alignment and central tendency estimation for brain atlas construction. In: Workshop on Statistical Registration: Pair-wise and Group-wise Alignment and Atlas Formation.
- . MAP MRF joint segmentation and registration. Medical Image Analysis. 2003;7(4):539–552
- Xiaohua, C., Brady, M., Rueckert, D., 2004. Simultaneous segmentation and registration for medical image. In: International Conference on Medical Image Computing and Computer Aided Intervention, 3216, pp. 663–670.
- . Simultaneous segmentation and registration of contrast-enhanced breast MRI. Information Processing in Medical Imaging. 2005;3565:126–137
- Yeo, B.T.T., Sabuncu, M., Mohlberg, H., Amunts, K., Zilles, K., Golland, P., Fischl, B., 2007. What data to co-register for computing atlases. In: Proceedings of the International Conference on Computer Vision, IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis.
- Yeo, B.T.T., Sabuncu, M., Desikan, R., Fischl, B., Golland, P., 2007. Effects of registration regularization and atlas sharpness on segmentation accuracy. In: International Conference on Medical Image Computing and Computer Aided Intervention, pp. 683–691.
- . A variational framework for integrating segmentation and registration through active contours. Medical Image Analysis. 2003;7(2):171–185
- . Cortical surface shape analysis based on spherical wavelets. IEEE Transaction on Medical Imaging. 2007;26(4):582–597
- Yu, P., Yeo, B.T.T., Grant, E., Fischl, B., Golland, P., 2007b. Cortical folding development study based on over-complete spherical wavelets. In: Proceedings of MMBIA: IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis.
PII: S1361-8415(08)00058-3
doi: 10.1016/j.media.2008.06.005
© 2008 Elsevier B.V. All rights reserved.
« Previous
Next »
Medical Image Analysis
Volume 12, Issue 5
, Pages 603-615
, October 2008
